Generate a compositional differential abundance plot

This function returns a plot to visualize differential abundance of taxa between conditions, compared to all other taxa as references. These differential abundances should already have been calculated with [add_codifab].

codifab_plot(ta, diffabun_var)

Arguments

ta

A tidyamplicons object

diffabun_var

The variable with differential abundances in the taxon_pair table

Value

A ggplot object

Details

Significance of tests is determined by capping the false discovery rate at 10 non-independent tests. See [p.adjust].