Read community data written by tidyamplicons

Read community data written by tidyamplicons

read_tidyamplicons(
  din,
  samples = "samples.csv",
  taxa = "taxa.csv",
  abundances = "abundances.csv"
)

Arguments

din

directory containing the a sample, taxa and abundances table in csv format

samples

the name of the samples table, defaults to samples.csv

taxa

the name of the taxa table, defaults to taxa.csv

abundances

the name of the abundances table, defaults to abundances.csv